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Harold W. Schranz and Michael A. Collins,
Nonlinear resonance and torsional dynamics:
Model simulations of HOOH and CH3OOCH3,
J. Chem. Phys. 98, 1132-1148 (1993).
PAPER (POSTSCRIPT)
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Simple models of the vibrational dynamics of HOOH and CH3OOCH3
are investigated by classical trajectory methods. Nonlinear
resonances due to kinematic coupling between the torsional motion
and symmetric bond bending are found to have significant
dynamical effects in some cases. The timescales and magnitudes of
these energy transfer processes are examined.
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Michael A. Collins and Harold W. Schranz,
Quantum simulations of nonlinear
resonance and torsional dynamics,
J. Chem. Phys. 100, 2089-2103 (1994).
PAPER (POSTSCRIPT)
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A simple model of the vibrational dynamics of ABBA type
sequentially bonded tetra-atomic molecules is investigated by
quantum mechanical methods. The model Hamiltonian excludes bond
stretching and asymmetric bending but includes the kinematic
coupling between the torsional motion and symmetric bond bending
which results in nonlinear resonances. The effect of this
coupling on energy levels and the timescale of intramolecular
energy transfer is evaluated and discussed in terms of both
resonant and nonresonant effects.
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Harold W. Schranz and Michael A. Collins,
A model classical study of nonlinear resonance and torsional isomerisation,
J. Chem. Phys. 101, 307-321 (1994).
PAPER (POSTSCRIPT)
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A simple two degree of freedom classical model of the nonlinear
resonance interaction between symmetric bond bending and
torsional motion in linearly bonded tetra-atomic molecules is
investigated. The rate and mechanism of intramolecular
vibrational energy redistribution at different relative
vibrational frequencies is evaluated, and comparison is made with
quantum calculations. The rate of torsional isomerisation is
compared to the prediction of transition state theory, and
related to the observed intramolecular vibrational energy
redistribution.
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Kim Bolton, Sture Nordholm, and Harold W. Schranz,
The Fragmentation of One Dimensional Monatomic Chains under Tension
- Simulation and Statistical Theory,
Stuart Rice Festschrift,
J. Phys. Chem. 99, 2477-2488 (1995).
PAPER (POSTSCRIPT)
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A one dimensional monatomic chain under tensile stress has been
studied by molecular dynamics. The aim is to determine the
lifetime to chain breakage and to ascertain whether this event
can be described by simple statistical reaction rate theory.
Chains of two to twenty atoms have been simulated. A simple
transition state theory, equivalent to a nucleation theory for
one dimensional fluids, gives the main features of the decay rate
coefficient as a function of the applied stress. For finite
chain lengths an anharmonic RRKM theory provides a more accurate
rate coefficient but chain healing (reversible decay) in the
simulated motion causes a significant deviation particularly at
high chain energy. The simulation is extended to chain arrays
which show greatly increased nonstatistical effects.
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Sture Nordholm and Harold W. Schranz,
Collisional Energy Transfer in Unimolecular Reactions.
Statistical Theory and Classical Simulation,
in Advances in Chemical Kinetics and Dynamics,
edited by J. R. Barker (JAI Press, Conn., 1995)
Volume 2A, pp 245-281.
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PAPER(POSTSCRIPT)
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A review is presented of our recent work on collisional
energy transfer in the context of unimolecular reaction rate
theory. The main aim is to find a collision frequency w and a
conditional energy transfer probability density P(E',E)
describing the transfer from energy E before to energy E' after
the collision. The traditional strong collision assumption and
the more recent ergodic collision theory are considered.
Extensions obtained by introducing an assumption of impulsive
collisions are noted. The collision frequency concept is found to
differ in the statistical theories (hit or miss) and reality or
simulations (continuous scale between hit and miss) requiring
attention in comparisons of results. Results obtained in detailed
classical trajectory simulations of small molecule collisions (
Ar + Br2, Br2 + Br2, Ar + SO2) are surveyed and discussed with an
emphasis on angular momentum conservation and other nonergodic
effects. The dependence of energy transfer efficiency on the
hardness and capture strength of the intermolecular potential is
also discussed.
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Harold W. Schranz and Michael A. Collins,
Intramolecular Vibrational Energy Redistribution
and Torsional Isomerization: A Model Classical and Quantum Study,in
Proceedings of the First Electronic Computational Chemistry Conference,
edited S. Bachrach (ARInternet , Landover MD, 1995).
PAPER (HTML)
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An initial study, considered the nonlinear resonant interaction resulting
from kinematic coupling between the torsion mode and other modes in
sequentially bonded ABBA type tetra-atomic molecules. It was found
that the nonlinear resonant interactions were most likely to involve the
symmetric bending mode.
In order to facilitate a quantum study of the nonlinear resonance between
the symmetric bend and torsion modes a reduced dimensional model was employed.
The low dimensionality of the system also makes it amenable to the methods used
commonly in the study of ergodic properties of nonlinear classical dynamical
systems e.g. surfaces of section, phase space plots. The rate of torsional
isomerization is compared to the prediction of Transition State Theory, and
related to the observed intramolecular vibrational energy redistribution (IVR).
The dependence of the nonlinear resonance on the relevant kinematic terms in
the Hamiltonian is clearly demonstrated in both the quantum and classical
studies. Whereas the mechanisms for the nonlinear resonance is essentially the
same, the exact frequency matching required, and strength and timescales of
the resulting energy transfer can be significantly different. The extent to
which classical studies of IVR can be used to make quantitative predictions
will be discussed.
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Harold W. Schranz and Michael A. Collins,
Intramolecular Vibrational Energy Redistribution
and Torsional Isomerization: A Model Classical and Quantum Study,
in Ultrafast Chemical and Physical Processes in
Molecular Systems, Proceedings of Femtochemistry: The Lausanne Conference,
(M. Chergui ed.) World Scientific, Singapore, 1996, pp 206-209.
PAPER (POSTSCRIPT)
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The nonlinear resonant interaction resulting from kinematic coupling between
the torsion mode and other modes in sequentially bonded ABBA type tetra-atomic
molecules is considered and found to most likely involve the symmetric bending
mode. The rate of torsional isomerization is related to the observed extent of
intramolecular vibrational energy redistribution (IVR).
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Harold W. Schranz, Thomas D. Sewell and Sture Nordholm,
Statistical and Dynamical Behaviour in the
Isomerisation of Methyl Isocyanide,
in Ultrafast Chemical and Physical Processes in
Molecular Systems, Proceedings of Femtochemistry: The Lausanne Conference,
(M. Chergui ed.) World Scientific, Singapore, 1996, pp 202-205.
PAPER (POSTSCRIPT)
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A classic prototype reaction in the study of unimolecular
reactions is the isomerisation of methyl isocyanide. Most
experimental studies have given rate constants consistent
with statistical behaviour even though trajectory studies
have given strong indications of non-statistical and mode
specific behaviour. The aim of our more detailed
theoretical study is to determine the role of statistical
and nonstatistical behaviour in the subsequent reaction
dynamics of locally and microcanonically excited
CH3NC molecules.
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Lu Ming and Sture Nordholm and Harold W. Schranz,
On the Estimation of Anharmonic Densities of States of Molecules,
Chem. Phys. Lett. 248, 228-236 (1996).
PAPER (POSTSCRIPT)
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A simulation method for the estimation of anharmonic densities of
states of classical molecular models is described. The method is based
on the equilibrium energy distribution established in an uncoupled
dimer of the anharmonic molecule and a reference molecule whose density
of states is known analytically as a function of energy. Applications
to one-dimensional chain molecules and small clusters of atoms joined
by Morse bonds indicate that the method is both simple and reliable.
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Harold W. Schranz and Thomas D. Sewell,
Statistical and Dynamical Behaviour in the Unimolecular Reaction Dynamics
of Polyatomic Molecules,
THEOCHEM, 368 (1996) 125-131.
PAPER (POSTSCRIPT)
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Elsevier WWW Site (HTML)
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The dominant theories of unimolecular reaction are statistical. A
fundamental assumption is that the timescale on which energy moves
about a reactant molecule is much shorter than the timescale for
reaction. It is assumed that intramolecular vibrational energy
redistribution (IVR) is globally rapid throughout the molecular phase
space.
It has been widely thought that the assumption of rapid IVR referred
to above is valid for sufficiently large polyatomics. Much of the
supporting evidence for this view comes from indirect experimental
studies of IVR and comparisons of statistical and dynamical
calculations.
However, the presence of a fast IVR rate, as derived from some
experiments, does not automatically ensure the reaction dynamics will
be statistical. In fact, in recent studies, we have shown that even
in the presence of fast IVR rates between some modes the reaction
dynamics can be extremely nonstatistical. Secondly, most comparisons
of statistical and dynamical calculations have made simplifying
assumptions which render the comparisons ambiguous.
In the present paper, we investigate results of recent statistical
and dynamical calculations performed on identical potential energy
surfaces for a range of polyatomic molecules. Our ultimate goal is to
determine how the extent and timescale of IVR plays a role in
determining the statistical or nonstatistical behaviour in the
subsequent unimolecular reaction dynamics of locally and
microcanonically excited polyatomic molecules.
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Harold W. Schranz,
Mode to Mode Energy Flow Amongst the Ring Modes of Benzene,
THEOCHEM, 368 (1996) 119-124.
PAPER (POSTSCRIPT)
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Elsevier WWW Site (HTML)
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How energy moves around the vibrational modes of a polyatomic
molecule, such as benzene, is of considerable interest, both
spectroscopically and theoretically. Much effort has been devoted to
observing and understanding how energy is transferred out of
initially excited overtone states involving the CH stretching modes.
Significantly less study has been devoted to an understanding of how
and on what timescale energy is transferred amongst the ring modes.
Such low frequency modes dominate the vibrational state density and
also play a role in the irreversible nature of the decay out of C-H
modes.
The motivation for the present classical trajectory study,
is to model the results of recent experimental observations regarding
the extent and timescale of IVR involving the ring modes. The
linewidths found experimentally were instrument limited at 1 cm-1 for
a range of excited ring modes for excitations of between 1200 and
8200 cm-1 yielding an upper limit on the IVR rate of 0.094 ps-1. This
result is consistent with the results of our trajectory calculations
which reveal an initially rapid decay followed by slow IVR at longer
times.
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Terry J. Frankcombe, Rob Stranger and Harold W. Schranz,
The intermolecular potential energy surface of CO2-Ar
and its effect on collisional energy transfer
Internet Journal of Chemistry, 1 (1998) 12.
PAPER (POSTSCRIPT)
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Paper (Internet J. Chem.)
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Classical molecular dynamics (MD) is a useful way of studying intra- and
inter-molecular energy transfer in gas-phase collisional processes.
However to perform these MD simulations a global analytic potential energy
surface (PES), which is not directly experimentally observable, is required
to determine the forces on the constituent atoms of the colliding species.
Often a functional form of the PES is assumed and the parameters adjusted
until the surface reproduces a set of experimental observables.
We have used both conventional ab initio methods and density functional
theory methods to generate points on the PES for the carbon dioxide-argon
colliding system at different levels of theory. To the intermolecular part
of these potential profiles we have fit a variety of simple functional
forms. We used MD simulations to look at the effect of the subtle
differences in shape of the PES on the average energy transfered per
collision (<
E>) and
higher energy transfer moments
(such as <
E2>).
There were found to be
significant quantitative differences between the energy transfer moments
generated using
the different functional forms, even when these forms were fit reasonably
well to the same data.
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M.A. Bennett, M. Bown, D.C.R. Hockless, J.E. McGrady, H.W. Schranz,
R. Stranger, and A.C. Willis,
Dissociative and non-dissociative pathways in
the endo to exo isomerization
of tetramethyl-o-xylylene complexes of ruthenium and osmium,
ML3{h4-o-C6Me4(CH2)2}
{M=Ru, L= PMe3; M=Os, L=PMe3, PMe2Ph}.
Formation of Hexamethylbenzene-1,2-diyl complexes by ligand addition to the
exo- osmium complex,
Organometallic 17 (1998) 3784-3797.
Abstract
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Supporting Information
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Treatment of the (eta(6)-hexamethylbenzene)ruthenium(II) and
-osmium(II) salts [M(O-2-CCF3)L-2(eta(6)-C6Me6)]PF6 (M = Ru, L = PMe3;
M = Os, L = PMe3, PMe2Ph) in the presence of L with KO-t-Bu gives
exclusively the endo- (tetramethyl-o-xylylene)metal(0) complexes
ML3{eta(4)-endo-o-C6Me4(CH2)(2)}, endo-1, -2, and -3, respectively, in
high yield; these-are protonated by an excess of triflic acid
(CF3SO3H, TfOH) to give the (eta(6)-hexamethylbenzene)metal(II) salts
[ML3(eta(6)-C6Me6)](OTf)(2) [M = Ru, L = PMe3 (4); M = Os, L = PMe3
(5); M = Os, L = PMe2Ph (6)). Complexes 4-6 revert to endo-1-3 on
treatment with. KO-t-Bu, whereas for M=Ru, L=PMe2Ph the complexes
[ML3(eta(6)-C6Me6)](2+) and [M(O2CCF3)L-2(eta(6)-C6-Me6)](+)/L react
with KO-t-Bu to give exclusively the exo isomer,
Ru(PMe2Ph)(3){eta(4)-exo-o-(CH2)(2)C6Me4} (exo-7). The endo complexes
1-3 are converted quantitatively into the corresponding exo isomers in
toluene in the temperature range 65-106 degrees C, the process being
first order in endo complex. Kinetics studies in the presence of PMe3
(for 1 and 2) or PMe2-Ph (for 3) indicate that two pathways are
available: one depends on initial dissociation of L and proceeds
through a bis(ligand) intermediate or intermediates, e.g.,
ML2{endo-o-C6-Me4(CH2)(2)} and ML2{exo-o-(CH2)(2)C6Me4}, and the other
does not. The dissociative mechanism is predominant for M = Ru, L =
PMe3, whereas the nondissociative or direct mechanism plays the
dominant, possibly exclusive, role for M = Os, L = PMe3. The osmium(0)
compound exo-2 adds PMe3 irreversibly to give the sigma-bonded
(hexamethylbenzene-1,2-diyl)osmium(II) complex
Os(PMe3)(4){kappa(2)-o-(CH2)(2)C6Me4} (8), whereas the corresponding
PMe2Ph derivative 9 is in equilibrium with exo-3 and PMe2Ph and cannot
be isolated; the ruthenium(0) compound exo-1 is inert toward PMe3.
Density functional calculations on the model compounds
ML3-{eta(4)-exo-o-(CH2)(2)C6H4} and ML4{kappa(2)-o-(CH2)(2)C6H4}(M =
RU, Os; L = PH3) correctly reflect the observed stability order Os >
Ru for the diyl complex but predict the latter to be more stable than
the eta(4) complex far both elements. In this case, the usual
computational simplification of replacing a tertiary phosphine by PH3
is probably unjustified, The molecular structures of the eta(4)
complexes endo-3, exo-3, and exo-1 and of the diyl complex 8 have been
determined by X-ray crystallography. The endo- to exo-o-xylylene
isomerizations are compared with the intramolecular migrations that
occur in Fe(CO)(3)(eta(4)-polyene) and
Cr(CO)(3)(eta(6)-substituted-naphthalene) complexes.
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H.W. Schranz,
Chemistry and the World Wide Web,
Chemistry in Australia,
December 1998,
pp. 9-11.
PAPER (PDF)
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A brief overview of a few of the many current and potential
uses of the WWW in Chemistry. The focus is on selected examples of
useful chemical WWW sites,
the emergence of electronic journals and electronic conferences.
Some useful paper-based references and WWW links are given.
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Harold W. Schranz,
Harold W. Schranz, Sean C. Smith, Alexander M. Mebel and Sheng H. Lin,
Prediction of absolute rate coefficients and product branching ratios
for the C(3P) + allene reaction system,
J. Chem. Phys. 117(2002) 7055-7067.
PAPER PREPRINT (PDF)
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J. Chem. Phys. 117(2002)
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PAPER (JCP)
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Complex chemical reactions in the gas phase can be decomposed into a
network of elementary e.g., unimolecular and bimolecular! steps which
may involve multiple reactant channels, multiple intermediates, and
multiple products. The modeling of such reactions involves describing
the molecular species and their transformation by reaction at a
detailed level. Here we focus on a detailed modeling of the
C(3P)+allene (C3H4) reaction, for which molecular beam experiments and
theoretical calculations have previously been performed. In our
previous calculations, product branching ratios for a nonrotating
isomerizing unimolecular system were predicted. We extend the previous
calculations to predict absolute unimolecular rate coefficients and
branching ratios using microcanonical variational transition state
theory (m-VTST) with full energy and angular momentum resolution. Our
calculation of the initial capture rate is facilitated by systematic
ab initio potential energy surface calculations that describe the
interaction potential between carbon and allene as a function of the
angle of attack. Furthermore, the chemical kinetic scheme is enhanced
to explicitly treat the entrance channels in terms of a predicted
overall input flux and also to allow for the possibility of
redissociation via the entrance channels. Thus, the computation of
total bimolecular reaction rates and partial capture rates is now
possible.